Classical map of mutant genes of Arabidopsis (updated 6/6/1996)
Data are organized into columns which show the map location in cM and locus name. Genes marked with an asterisk (*) were initially placed on the recombinant inbred map based on recombination data with molecular markers and then transferred to the classical map as described in this link. Map locations shown here are estimates based largely on 2-point recombination data. The orders of closely-linked genes may therefore differ slightly from those shown.
Please contact David Meinke to update information in this table
Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5 cM Locus cM Locus cM Locus cM Locus cM Locus ------------ ------------ ------------ ------------ ------------- 0 SUS1 0 EMB91 0 EMB145 0 FRI 0 CTR1 0 AN 4 EMB34 1 ILR1* 5 GA1 1 PTL 1 RGN 8 STI 2 QRT2* 9 EMBRG7 1 EIN2 1 CER1 11 EMB93 3 EMB52 10 HY4 1 EMB24 3 EMB233 15 EMB62 4 DOC1 11 CSI 2 TFL1 4 FUS5* 17 EMB239 4 PDS2 15 BP1 5 EMB166 6 EMB173 18 EMB58 5 EMB1 18 EMB132 6 EMB256 9 POM1* 20 EMB146 6 EMB286 20 DET1 6 TT7 10 ABA3 22 EMB57 7 RPM1* 21 EMB160 6 EMB175 11 AXR3 28 TAG1 8 FAD7 22 FUR1 8 HY5 11 RPS5* 29 IAE1* 11 DGD1* 22 TT8 8 CHP7 11 EMB176 32 FVE 12 HY2 27 EMB171 8 FLC 12 EMB142 35 PHYB 12 SPY 27 EMB148 9 EMB163 12 FHA 35 SUR 13 COP10* 28 CP1 9 EMB68 12 DET3 36 CHL2 14 EMB51 29 COP9 9 HXC1* 12 ALB1 38 CP2 16 FAD5 31 CN 10 LU 12 AXR1 46 GUN1* 16 FUS9 32 FCA 10 TRP5* 13 SEX1 47 CLV3 17 EMB153 33 EMB236 11 AMT1 14 KEU 47 ELF3 17 OMR1 34 TH3 12 EMF1* 14 CHL1 48 ER 17 VRN1* 34 EMB137 12 FY 16 PHYA 48 HY1 19 MTO1 37 ARA1 12 LAD* 19 DIS1 49 POM2* 20 FAD2 37 RPP5 13 CBB3* 19 TWN2* 50 FUS12* 23 EMB201 38 RPP4 13 TT4 21 EMB30 50 RTN* 24 EMB29 39 EMB81 13 CO 22 MP 51 EMB152 24 EMB95 39 EMB109 15 TFL2* 22 GA4 53 ABI5 26 DWF1 40 ALB4 15 ALF4* 22 GAI 53 PY 27 PHO1 41 EMB230 15 ANL1 23 DW1 54 LAN 27 MS2 42 AG 15 ALB2 26 PDS1 58 EMB53 28 EMB90 44 CH42 16 EMB262 26 EMB43 58 FAD3 30 EMB224 44 EMB181 20 FUS11* 27 EMB232 60 RXC1* 32 CHM 45 RPP2 20 TSL 27 EMB10 60 COP1 33 AXR2 46 EMB130 20 EMB213 29 EMB131 62 PID 35 SUP 47 EMB257 21 PI 29 EMB127 63 RE 35 EMB125 48 IM 22 CHL6 29 LEC1 64 DET2 38 ABI3 50 EMBRG5 23 ADD1* 32 PFL 64 GRL 41 FUS3 50 RML1* 23 MS1 33 CHS1 64 AS1 46 GL1 52 EMB140 23 FS1 33 TH1 65 EMB18 52 RPP1 52 CER2 23 EMB86 33 GI 65 EMB101 53 UVR1 53 GA5 27 EMB2 34 EMB260 66 AUX1 56 RPP13* 54 FAD6 28 TTG 35 ACT1 66 ABI4 59 VAL1 54 FWA 30 EMB108 35 TRP4 67 BIO2 60 EMB65 55 ABI1 31 EMB222 42 EMB88 67 EMB225 61 NPH1 55 RPS2 33 GA3 45 DIS2 68 EMB111 62 RPT* 55 ACL1 35 SU 45 TED2* 70 EMB38 63 EMB167 55 EMB106 36 DOC2 46 UFO 71 FIL* 64 RPP11 56 EMB20 38 EMB269 46 CAL 74 SUL 68 ACD1 56 DRG* 39 EMB161 49 EMB126 75 VAR2 70 CSR1 57 EMB56 40 EMB215 51 RAC1 76 CER8 73 EMB69 58 TOR1 40 TNY* 55 TT1 77 CPC* 74 EMB172 58 EMB35 43 CH5 56 CHL3 77 EMB39 75 EMB149 58 EMB28 43 CUE1* 58 CH1 87 FPA 77 FK 59 EMB77 44 TT2 62 AXR4 81 TT5 60 EMB42 47 TH2 62 EMB22 81 AP3 60 RSS16 48 HCF109* 66 LE 84 CHS 61 CER4 50 BEL1 66 EMB27 84 EMB117 61 EMB70 51 EMB139 69 RPP7 85 EMB133 62 EMB107 53 GL3 69 EMB118 85 EMB154 63 EMB104 56 FAS2 70 ABA2 87 TIR1* 63 ELG 56 EMB141 70 AIN1 87 FUS6 64 EMB202 57 CAD1 70 CER5 88 CER7 64 FD 57 TT3 71 EMB244 90 TRP3* 66 CUD* 58 RPP8 75 STM 96 TT6 68 AP2 59 EMB9 76 EMB80 68 ACD2 60 EMB170 76 EMB128 68 SPT 62 ALS1* 83 ACL2* 69 FAD4 62 FUS4* 84 EMB71 73 CP3 63 PGM 85 AS2 76 CER9 64 ATS 86 SUS3 76 CBB2* 64 FUS8 87 CAR1* 65 VAR1 88 SAB* 68 ALF3* 88 FAS1 69 EMF2* 88 FT 69 TT10 89 WAM 70 EIR1 89 BUM 71 GR2 89 CLV2 71 EMB64 90 DOC3 72 LIT* 92 EMB41 74 BIO1 92 SMA4* 77 TZ 93 ETR 79 EMB67 95 NIM1* 79 TOC1* 96 CER6 80 COB* 97 EMBRG2 82 CER3 99 EMB179 82 LFY 99 AP1 82 EMB209 100 CRC 83 ETO1 100 EMB25 85 EMB87 102 EMBRG3 85 YI 103 PIN 85 EMB15 105 IAR1* 85 REV* 110 EMB54 86 PRC1 110 CLV1 90 MIN 113 EMB17 90 EMB16 113 EMB120 92 EMB246 114 ADH 98 ABA1 115 BOT1* 115 EMB156 116 NIA1 116 SUS2 118 GL2 119 GA2 122 FE